pwaltman
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Latest activity by pwaltman-
pwaltman created a post,
Is it recommended that we limit Mutect2 analysis to target regions if analyzing whole exome data?
AnsweredApologies if this is a duplicate question. I did try to find if it has been asked elsewhere, but couldn't find a definitive answer. Note, I've checked the Best Practices wdl script for Mutect2 (lin...
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pwaltman commented,
Does the Broad/GATK-team only provide the best practices as WDL scripts now? At one point, there used to be step-by-step tutorials on how to use and apply these tools, but these don't seem to be av...