Kate Herman
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Activity overview
Latest activity by Kate Herman-
Kate Herman created a post,
What's the minimal number of normal samples required to generate the SomaticPanelOfNormals?
AnsweredThis question was asked during the webinar on Nov 17, 2020. It is reposted here for posterity. Q: What's the minimal number of normal samples required to generate the SomaticPanelOfNormals? If I ...
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Kate Herman created a post,
Will there be a DRAGEN-GATK public version made available for mutect2? If yes, any estimated timeline you can share?
AnsweredThis question was asked during the webinar on Nov 17, 2020. It is reposted here for posterity. Q: Will there be a DRAGEN-GATK public version made available for mutect2? If yes, any estimated time...
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Kate Herman commented,
This question was answered during our live webinar. The answer is copied below for posterity. A: Each of the model based filters uses the data you provide to M2 and FilterMutectCalls. As an examp...
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Kate Herman created a post,
Is the seminar being recorded?
AnsweredThis question was asked during the webinar on Nov 17, 2020. It is reposted here for posterity. Q: Is the seminar being recorded? A: Yes, this seminar is being recorded. The recording will be made...
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Kate Herman created an article,
GATK Workshops: Cancellations & Rescheduling
In light of recent developments regarding the ongoing COVID-19 outbreaks, we have been closely monitoring risks around GATK workshops. While science is very important, especially at a time like thi...
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Kate Herman commented,
Hi lemon soft, The installation instructions above were written for use on Linux and Mac operating systems. You should be able to enter the commands as they are in the article. If you have any trou...