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AM

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https://github.com/aalnawfal1992/aalnawfal1992

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Latest activity by AM
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    AM commented,

    1. Community
    2. General Discussion
    3. GATK Best Practices validation

    Hi Marcella, How do you define valid and invalid pipelines? I assume you are processing clinical data. As far as I know, there are no cutoffs or standards that judge your pipeline as valid or inval...

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    AM commented,

    1. Community
    2. General Discussion
    3. GATK Best Practices validation

    Hi Marcella, If you've modified your pipeline and validated it, then you're good to go, and your pipeline is valid. For my part, I used GATK's best practices for short variant discovery in Human WE...