Luc Marchand
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Latest activity by Luc Marchand-
Luc Marchand commented,
Thanks both for the answers. I will test those new switches / features as soon as I can.
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Luc Marchand commented,
More info on the subject. I had followed the steps described here: https://gatk.broadinstitute.org/hc/en-us/articles/4407897446939--How-to-Run-germline-single-sample-short-variant-discovery-in-DRA...
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Luc Marchand created a post,
Dragen-mode seems dangerous
Hi. I have now encountered multiple instances where HaplotypeCaller with Dragen-mode miss or misscall a real variant. These variant have been validated by ortholog methods. It might be different...
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Luc Marchand commented,
The google links seems obsolete. The reference hash table files are not there either.