周尤佳
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About RNA seq snp filtration
REQUIRED for all errors and issues: a) GATK version used:v4.4.0.0 b) Exact command used: gatk VariantFiltration \ -R GRCh38.p14.genome.fa \ -V wt1.rdup.SNC.RG.filtered.vcf \ -O wt1.rdup.SNC...
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Funcotator log says "Cannot create complete funcotation for variant at chr1:25813992-25814012 due to alternate allele: *"
REQUIRED for all errors and issues: a) GATK version used:gatk-4.4.0.0 b) Exact command used:gatk Funcotator \ --variant /public/slst/home/lict/ZYJ/sladuk/gatk/filtered.I8_L1.rdup.SNC.RG.vcf \ ...