mina ming

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  • Using pVCF for variant allele frequency

    Hi I have access to DRAGEN population level WGS variants, pVCF format Can I use this files to calculate VAF for a set certain list of patient IDs and colon cancer? Thanks for any help

  • What should I do with vcf file now


    Hello I have called SNVs with Mutect2, now I filter column of a file called filtered vcf I have a lot of things like > length(unique(filtered.vcf$FILTER)) [1] 409 >  > unique(filtered.vcf$FILTER) ...