Ekin Köni
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Recent activity by Ekin Köni Sort by recent activity-
ı will try this suggestion thank you.
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The Genome Analysis Toolkit (GATK) v4.2.3.0
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##fileformat=VCFv4.1
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ey, ı am facing the same error and can't figure it out away. A USER ERROR has occurred: Cannot read file:///mnt/e/thesis/data/hg38_v0_Mills_and_1000G_gold_standard.indels.hg38.vcf.gz because no su...
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That's incredible. as you said I include the dict file and the reference-related error is now disappeared. thank you for your kind response, it was really helpful for me and I hope that it will hel...
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first of all, thank you for this fast return. gatk SplitNCigarReads \ -R Homo_sapiens.GRCh38.dna.primary_assembly.fa \ -I mySample68dupli.bam \ -O mySample68snc.bam A USER ERROR ...
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hi, ı'm struggling to run SplitNCigar because I used Hisat2 in my rnaseq mapping that's why ı have 8 .ht2 files and they are not in fasta format. do you have any suggestions for me to try solving t...