Wei-Yang BAI
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Latest activity by Wei-Yang BAI-
Wei-Yang BAI commented,
See it. Thanks Laura!
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Wei-Yang BAI commented,
Hi, I know that DRAGEN-GATK can be applied in gVCF calling and joint-calling. I now have a bunch of gVCFs that were directly called using HaplotypeCaller without setting DRAGEN mode. I would like t...
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Wei-Yang BAI commented,
Thanks for the kind response and hint regarding the coordinate system, SkyWarrior!
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Wei-Yang BAI created a post,
gatk ValidateVariants: WARN ValidateVariants - Current interval chrx:xxx-xxx overlaps previous interval ending at xxx
Dear GATK Team, I'm getting the warning message when checking my gvcf using ValidateVariants. I checked the logs, including bwa mem alignment, gatk BaseRecalibrator, ApplyBQSR and HaplotypeCaller, ...