Michael
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Michael created a post,
GATK VariantFiltration NumberFormatException when reading decimal values
Hi, I have stumbled over an error when trying to apply GATK VariantFiltration on fields that contain decimal values such as MQ or AS_MQ using gatk VariantFiltration \ -R $REF \ -V $1 \ -O ...
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Michael commented,
gatk GenomicsDBImport \ -V data/gvcfs/mother.g.vcf \ -V data/gvcfs/father.g.vcf \ -V data/gvcfs/son.g.vcf \ --genomicsdb-workspace-path my_database \ --intervals chr20,chr21 The ex...