
Wondessen Ayalew
- Total activity 20
- Last activity
- Member since
- Following 2 users
- Followed by 0 users
- Votes 0
- Subscriptions 6
Posts
Recent activity by Wondessen Ayalew Sort by recent activity-
VCF file SNP ID missing
REQUIRED for all errors and issues: a) GATK version used: GATK 4.3.0b) Exact command used: I used the command stated on gatk4.3.0 without any modifications and I combine and genotyped my vcf fil...
-
ApplyBQSR
REQUIRED for all errors and issues: a) GATK version used: GATK4.3 b) Exact command used: gatk ApplyBQSR -R ../reference/Bos_taurus.ARS-UCD1.2.dna.toplevel.fa -I ../data/mapped/ABigar/Abi1_dedup.ba...
-
GATK configration
REQUIRED for all errors and issues: I am running gatk for the first time the BaseRecalibrator toolsa) GATK version used: 4.3.0b) Exact command used: gatk BaseRecalibrator -I ../data/Afar_rD/Afar_1...