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Georgii Ozhegov

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Latest activity by Georgii Ozhegov
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    Georgii Ozhegov commented,

    1. Tool Index
    2. 4.4.0.0
    3. FilterIntervals

    It seems that the default value of  --low-count-filter-percentage-of-samples is 50 and not 90.

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    • Georgii Ozhegov
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    Georgii Ozhegov commented,

    1. Tool Index
    2. 4.3.0.0
    3. SelectVariants

    --remove-unused-alternates don't change the INFO field according to the changes (for example AQ field after removing the unused allele still contains info about this unused allele). Sometimes it ca...

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    Georgii Ozhegov commented,

    1. Getting Started
    2. FAQ
    3. Does GATK work on non-diploid organisms?

    On GitHub, you mentioned that the problem with haploid GenpmicGBImport has already been solved: https://github.com/broadinstitute/gatk/issues/3342. Is it just not updated news here?    

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    • Georgii Ozhegov
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