Rea Kalampaliki
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Recent activity by Rea Kalampaliki Sort by recent activity-
Thank you, Homo_sapiens_assembly19_1000genomes_decoy_Homo_sapiens_assembly19_1000genomes_decoy.fasta seems to match to hs37d5.
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Hello! Seems like the method documentation, parameters reccomendations and tutorial links link to the main page.
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Hello! Is there any way to test the compatability of contigs between a bam file and a reference genome fasta file before the analysis. In case, we are not sure if the bam and reference genome match?
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Genevieve Brandt (she/her) thank you very much,I face no contigs incompatability issues, when I set:$ref_indels: hg19_v0_Mills_and_1000G_gold_standard.indels.b37.sites.vcf $ref_snps: file comes aft...
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Hello! I am receiving the exact error with the file: hg19_v0_Homo_sapiens_assembly19.dbsnp138.vcf Please help:) ref_snps='./reference_genome/hg19_v0_Homo_sapiens_assembly19.dbsnp138.vcf'ref_indels=...