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Nicolas Rochette

Total activity 5
Last activity May 27, 2022 17:41
Member since January 31, 2022 04:08

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Activity overview

Latest activity by Nicolas Rochette

Nicolas Rochette commented, May 27, 2022 17:40
arguably it's a bug that this is even a warning ("warning: input is normal" pattern) other than confusing the users and producing huge log files this leads to things like the silencing of warnings ...
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- Nicolas Rochette
- May 27, 2022 17:41
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- 1 vote
Nicolas Rochette commented, May 27, 2022 17:07
old answer https://sites.google.com/a/broadinstitute.org/legacy-gatk-forum-discussions/2017-01-18-2016-08-11/8323-Why-do-MQRankSum-and-ReadPosRankSum-not-appear-in-some-vcf-file-entries
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- Nicolas Rochette
- May 27, 2022 17:09
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Nicolas Rochette commented, January 31, 2022 04:08
I've run into the "genotype does not contain likelihoods" problem as well, while running a pipeline that had worked before, with GATK GenotypeGVCFs 4.2.4.1
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- Nicolas Rochette
- January 31, 2022 04:09
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