Fong Chun Chan
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Latest activity by Fong Chun Chan-
Fong Chun Chan commented,
Thanks Genevieve. Do you know if it is possible to count fragments using the CollectReadCounts or know of another GATK tool that can do this? Kind regards, Fong
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Fong Chun Chan created a post,
Does CollectReadCounts Count Fragments or Individual Reads?
AnsweredHi, I wasn't able to find any clear documentation regarding this. Does the CollectReadCounts tool count fragments (i.e. sets of paired-end reads) or individual reads over intervals? According to ht...
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Fong Chun Chan commented,
According to https://github.com/broadinstitute/gatk/pull/4564, it seems to have now been replaced with CollectReadCounts.