
Sonia Wolf
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Activity overview
Latest activity by Sonia Wolf-
Sonia Wolf created a post,
Panel of Normals ethnicity
AnsweredI am running Mutect2 on some tumour samples (tumor/normal). I have some control subjects who do not have cancer, from whom I could generate a Panel of Normals, but only around 10. I could use the ...
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Sonia Wolf commented,
Dear Genevieve, Is there now a chain file to liftover from b37 to hg19? This is a big problem because the references are all using b37 contigs (1,2,3 etc) whereas most of us have been using hg19 co...
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Sonia Wolf commented,
Hi Nick, Can't help but am looking for the same thing so would be interested in the answers!
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Sonia Wolf created a post,
selecting allele depth Mutect2
AnsweredI wish to select my variants based on allele depth; however when I do this I get no results at all. If I do "DP > 10" that is fine, but if I want the allele depth of the alternate allele- I get no ...