yangjw
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GATK 4.3.0.0 Mutect2 fail to call variant
AnsweredREQUIRED for all errors and issues: a) GATK version used: 4.3.0.0b) Exact command used: --linked-de-bruijn-graph true --max-reads-per-alignment-start 0 c) Entire program log: run sucess. See detia...
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Asking for advice on Mutect2 calling in somatic but amplicon data
Hi, GATK team! a) GATK version used: 4.3.0.0b) Exact command used: Mutect2 --mitochondria-modec) Entire program log: running sucess but confused by the results with differen parameters I am analys...