Documentation Questions
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Best practice trios0 votes 0 comments
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BuildBamIndex0 votes 4 comments
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Report file CreateExtendedIlluminaManifest Report file1 vote 1 comment
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Can't access google cloud it says permission required0 votes 2 comments
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RGID versus RGPU0 votes 1 comment
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Documentation for interval files in resource bundle0 votes 1 comment
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UmiAwareMarkDuplicatesWithMateCigar - UMI_METRICS0 votes 2 comments
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CalculateFingerprintMetrics Usability On Somatic Samples0 votes 1 comment
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Request: examples of svtk usage0 votes 1 comment
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Calculating FQ or an FQ-like score from information in GATK4 vcf0 votes 1 comment
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GenomicsDBImport function is not executing: Aborted (core dumped)0 votes 2 comments
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How to use Funcotator for PostprocessGermlineCNVCalls results0 votes 1 comment
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What does RAW_MQ annotation mean ?0 votes 3 comments
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Picard CollectHsMetrics output0 votes 3 comments
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Single sample germline - VQSR+CNN or just CNN0 votes 5 comments
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Genomes in the cloud docker file0 votes 0 comments
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What's wrong with my GATK HaplotypeCaller step's codes?0 votes 1 comment
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How can I get Sample Summary0 votes 1 comment
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GATK4.2.3.0 HaplotypeCaller error0 votes 1 comment
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How does Genomicsdbimport for polyploids work?0 votes 2 comments
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Difference between the different annotation groups available in GATK2 votes 1 comment
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Mark duplicates in merged bam files sorted by coordinates0 votes 2 comments
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What does PCT_MIX from CreateVerifyIDIntensityContaminationMetricsFile mean?0 votes 2 comments
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GenomicsDBImport java error0 votes 1 comment
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ApplyBQSRSpark ApplyBQSR has different results0 votes 3 comments