Documentation Questions
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BuildBamIndex0 votes 4 comments
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Best practice trios0 votes 0 comments
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vcf files for BQSR step Answered1 vote 4 comments
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mutect2 multi-sample Answered0 votes 35 comments
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What does RAW_MQ annotation mean ?0 votes 3 comments
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Can't access google cloud it says permission required0 votes 2 comments
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Report file CreateExtendedIlluminaManifest Report file1 vote 1 comment
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RGID versus RGPU0 votes 1 comment
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Picard SortSam error Answered0 votes 3 comments
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Picard CollectHsMetrics output0 votes 3 comments
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Issues with LiftoverVcf Answered0 votes 6 comments
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SamToFastq - bam order Answered0 votes 6 comments
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HaplotypeCaller using one sample split in two bam files Answered0 votes 3 comments
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UmiAwareMarkDuplicatesWithMateCigar - UMI_METRICS0 votes 2 comments
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Documentation for interval files in resource bundle0 votes 1 comment
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ASEReadCount Only Outputting the First Chromosome Answered0 votes 3 comments
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Too many duplicate articles Answered0 votes 2 comments
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Where is the list of annotations and annotation groups? Answered2 votes 7 comments
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CalculateFingerprintMetrics Usability On Somatic Samples0 votes 1 comment
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Request: examples of svtk usage0 votes 1 comment
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germline mutation calling using per-sample module Answered0 votes 2 comments
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ASEReadCounter outputting blank table Answered0 votes 4 comments
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GenomicsDBImport function is not executing: Aborted (core dumped)0 votes 2 comments
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Calculating FQ or an FQ-like score from information in GATK4 vcf0 votes 1 comment
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How to use Funcotator for PostprocessGermlineCNVCalls results0 votes 1 comment
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GATK CNV somatic panels of normal design Answered0 votes 3 comments
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Mitochondrial shifted reference Answered0 votes 4 comments
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Limit core use of DetermineGermlineContigPloidy & GermlineCNVCaller Answered1 vote 1 comment