Documentation Questions
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is --dont-use-soft-clipped-bases discarded in HaplotypeCaller?0 votes 0 comments
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Genotype filtering still write "PASS" in filter field1 vote 1 comment
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Picard CollectHsMetrics PCT_TARGET_BASES Output0 votes 2 comments
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error:Argument --emit-ref-confidence0 votes 0 comments
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Funcotator 4.1.2.0 gencode for locatableXSV0 votes 1 comment
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Intervals and GenomicsDBImport0 votes 2 comments
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How does Mutect2 count read depth/coverage? Answered1 vote 11 comments
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CallCopyRatioSegments -- how does it work? Answered0 votes 3 comments
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Picard's CollectRnaSeqMetrics0 votes 0 comments
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Detailed reason for filtering by FilterMutectCalls0 votes 0 comments
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How to specify number of threads while running Mutect20 votes 0 comments
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Best practice trios0 votes 0 comments
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BuildBamIndex0 votes 4 comments
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Report file CreateExtendedIlluminaManifest Report file1 vote 1 comment
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Can't access google cloud it says permission required0 votes 2 comments
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RGID versus RGPU0 votes 1 comment
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Picard SortSam error Answered0 votes 3 comments
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Issues with LiftoverVcf Answered0 votes 6 comments
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Documentation for interval files in resource bundle0 votes 1 comment
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UmiAwareMarkDuplicatesWithMateCigar - UMI_METRICS0 votes 2 comments
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CalculateFingerprintMetrics Usability On Somatic Samples0 votes 1 comment
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Request: examples of svtk usage0 votes 1 comment
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Too many duplicate articles Answered0 votes 2 comments
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ASEReadCount Only Outputting the First Chromosome Answered0 votes 3 comments