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Mutect2: NuMTs filtering on RNA-seq Answered0 votes 2 comments
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DepthOfCoverage with -gene-list and readgroup as --partition-type options Answered0 votes 7 comments
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What is the 'physical phasing'0 votes 3 comments
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ERROR MESSAGE: No gender data for sample:sample70 votes 15 comments
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mitochondria_m2_wdl: MitochondriaPipeline Issues0 votes 12 comments
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Mitochondrial analysis - FilterMutectCalls autosomal-coverage is not an option Answered0 votes 3 comments
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How do I keep a glob from copying a file in Cromwell / WDL0 votes 1 comment
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How to Fix the follow ValidateSamFile error ?0 votes 1 comment
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Resource bundle for GRCh370 votes 2 comments
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filterSamReads stdout format error0 votes 15 comments
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How to work with CNN variant caller0 votes 3 comments
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LiftoverVcf: hg19 to hg38 all variants mismatched0 votes 3 comments
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Checking ReadGroup name in BAM file with GATK instructions0 votes 1 comment
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HaplotypeCaller and Read Group Errors0 votes 1 comment
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DepthOfCoverage in GATK4.1.9.0 with -gene-list option0 votes 4 comments
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Any documents for 199 columns in Funcotator output?0 votes 2 comments
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Cromwell stuck at WaitingForReturnCode on Mac0 votes 3 comments
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Reference Fasta vs Alt Reference Fasta0 votes 2 comments
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jar for mutect 1.1.71 vote 6 comments
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Comparison between ReadsPipelineSpark and MarkDuplicates0 votes 7 comments
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ValidateSamFile behavior1 vote 7 comments
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HaplotypeCaller -ERC GVCF -variant_index_type LINEAR1 vote 1 comment
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Where's the DRAGEN?0 votes 3 comments