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SelectVariants error0 votes 1 comment
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WDL RNA-seq Hisat20 votes 1 comment
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Dosages with Mutect20 votes 6 comments
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RealignerTargetCreator0 votes 2 comments
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Confusing GVCF results Answered0 votes 1 comment
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FilterMutectCalls failing filters0 votes 1 comment
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GATK mark duplicates error0 votes 2 comments
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run SVPreprocess and SVGenotyper for each sample0 votes 7 comments
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gatk3-register0 votes 1 comment
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Variable region not considered active region by HaplotypeCaller0 votes 1 comment
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How to execute workflow locally without docker0 votes 1 comment
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Extract individual samples from combined gvcf file0 votes 1 comment
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Can't add to PATH0 votes 2 comments
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Inquiry about the GATK Best Practices for variant calling on RNAseq0 votes 1 comment
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IlluminaBasecallsToSam - barcode was not expected0 votes 1 comment
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copyright issue0 votes 2 comments
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What kind of statistical methods genome strip used?0 votes 3 comments
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something wrong with MarkDuplicatesSpark0 votes 1 comment
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resource bundle b370 votes 1 comment
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CombineGVCF slowing down at certain region on chromosome 10 votes 3 comments
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Read counts in vcf files do not reflect local realignments0 votes 2 comments
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Problem Installing and testing GATK-4.1.7.01 vote 5 comments
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Genomestrip cannot find --ploidyMapFile0 votes 9 comments