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Merge different individual VCF0 votes 10 comments
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Extract individual samples from combined gvcf file0 votes 1 comment
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Inquiry about the GATK Best Practices for variant calling on RNAseq0 votes 1 comment
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gatk3-register0 votes 1 comment
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How to reduce the processing time of BwaMemIndexImageCreator0 votes 2 comments
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evaluation of the VCF file which is made using GATK0 votes 1 comment
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Funcotator: Sift and Polyphen fields are empty in MAF output0 votes 1 comment
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resource bundle b370 votes 1 comment
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MarkDuplicatesSparks not removing some duplicates?0 votes 15 comments
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copyright issue0 votes 2 comments
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Failed variants in BQSR and VQSR training sets0 votes 3 comments
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Output of PossibleDeNovo0 votes 1 comment
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Genomestrip cannot find --ploidyMapFile0 votes 9 comments
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IlluminaBasecallsToSam - barcode was not expected0 votes 1 comment
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When will AnalyzeCovariates support R/4.00 votes 1 comment
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Error when running FastaAlternateReferenceMaker0 votes 1 comment
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humanG1Kv37 to hg38 liftover issues0 votes 3 comments
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Error in running CollectGcBiasMetrics0 votes 1 comment
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Picard RnaSeqMetrics CORRECT_STRAND_READS and INCORRECT_STRAND_READS0 votes 1 comment
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Combining SE and PE reads for SNP calling0 votes 1 comment
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ReciprocalOverlapAnnotator error for Illumina data (both ERDS and CNVnator)0 votes 5 comments
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Mutect2: mitochondria mode weird0 votes 2 comments
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SelectVariants v4.1.6.0 doesn't select the variants as expected0 votes 5 comments
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something wrong with MarkDuplicatesSpark0 votes 1 comment
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GenotypeGVCF Output Only 1 Locus0 votes 1 comment