CalculateFingerprintMetrics Usability On Somatic Samples

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Kathryn Kananen

• September 13, 2022 04:16
• Edited

Will CalculateFingerprintMetrics be able to run on somatic samples or will it create false positives due to the heterozygosity level that might make the ratio fluctuate outside of what is considered "normal"? 

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  Genevieve Brandt (she/her)

  • September 13, 2022 18:08

  Thank you for your post, Kathryn Kananen! I want to let you know we have received your question and will be moving it to the Community Discussions -> Documentation Questions topic, as the Somatic topic is for reporting bugs and issues with GATK.

  We'll get back to you if we have any updates or follow up questions. Please see our Support Policy for more details about how we prioritize responding to questions. 

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