Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

GATK process banner

Need Help?

Search our documentation

Community Forum

Hi, How can we help?

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

Too many duplicate articles

Answered
0

2 comments

  • Avatar
    Anthony Dias-Ciarla

    Hi Дмитрий Голик,

    Thank you for writing to the GATK forum! I hope that we can help you sort this out.

    We really appreciate your feedback on your trouble with the tool indices. Unfortunately, this is an issue that other users have been experiencing. 

    We are actively working on finding the best solution for this! We hope to make it much easier for our users to find the most up-to-date tool indices for whichever tool they are using.

    In the meantime, we apologize for the extra trouble and inconvenience this causes. While you wait for us to implement a hopefully permanent solution, please find a useful link below.

    GATK Tool Index 

    There you will find links to all the tool indices for the most current and previous versions/releases of GATK. You can also find this page by navigating to the GATK homepage and clicking “Tool Index” on the top row (to the right of the GATK logo).

    I hope this helps! Thank you again for reaching out to alert us of this issue. If you have any other questions/comments, please do not hesitate to reach out.

    Best,
    Anthony

    0
    Comment actions Permalink
  • Avatar
    Anthony Dias-Ciarla

    Hi Дмитрий Голик,

    We haven’t heard from you in a while so we will be closing out your ticket in our system. If you still require assistance, you need only respond to this thread, and we’ll create a follow-up ticket to pick up where we left off.

    Thank you again for contributing to our GATK forum!

    Best,

    Anthony

    0
    Comment actions Permalink

Please sign in to leave a comment.

Powered by Zendesk