Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

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    Pamela Bretscher

    Hi Nish314,

    The GATK team no longer supports GATK3. Could you please update your GATK version and try again? 

    Kind regards,


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