Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

GenomicsDBImport java error


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    Genevieve Brandt (she/her)

    Hello, for posts regarding GATK issues, we require three items to be included in the post.

    1. GATK version number
    2. Exact command used
    3. Complete Stack Trace/Error log [Use -DSTACK_TRACE_ON_USEREXCEPTION to print the stack trace.] How to submit java arguments.

    Your post is missing these items that must be included so that we can thoroughly look into the problem. Please read our forum guidelines for more information.

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