Hi GATK Team,
I am working on a pipeline that has to write a minimal VCF to be funcotated. However, when I run `Funcotator` or `ValidateVariants`, I got the following error:
htsjdk.tribble.TribbleException$InvalidHeader: Your input file has a malformed header: We never saw the required CHROM header line (starting with one #) for the input VCF file
Attached a part of mt VCF file (where "#CHROM" does appear):
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT 759d9ab7-8584-45c6-8882-6b64697edfbf e94bafbc-cfcc-4b38-ab40-c87f2c091466
chr1 946293 . G T . PASS SOMATIC AD 79,0 105,20
Just in case there is confusion between whitespace vs tabs, I attached the file with the post.https://drive.google.com/file/d/1ckc_6qTAtepVJM4l9E7w6z_y1rUlf0fq/view?usp=sharing
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