I am trying to run BaseRecalibrator with my WGS data of human cancer samples according to current GATK best practice.
My reference genome is hg19.
To run BaseRecalibrator, I need known SNP, Indel files.
I found these files in b37 version in gs://gatk-legacy-bundles, but no files for hg19.
Does anyone know where I can get these files?
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