Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

problem with docker image for Copy Number Alterations tutorial



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    Genevieve Brandt (she/her)

    Hello Tatyana Zhuravleva, it looks like docker is trying to use the tag "latest" when you do not specify a tag, which is nonexistent for that docker image.

    The correct way to get the docker image is:

    docker pull spacecade7/tutorial_11682_11683:gatk4.0.1.1

    Thanks for bringing this to our attention, I will also reach out to our documentation team to make the tutorial more clear. 

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    Tatyana Zhuravleva

    Thank you, the clarified way works! 

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