Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

Error message VariantFiltration GATK 4.1.4.1

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    Bhanu Gandham

    First step is to check if the vcf is malformed. Use ValidateVariants tool to check you vcf file.

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