I am trying to calculate just the number of bases excluded due to being off target. I thought I could use PCT_EXC_OFF_TARGET, but this actually looks like it is a percent of a percent. All of these percents of different exclusion reasons equal 1 in all of my data sets, which confirms my theory that these are the percents of only the total excluded bases.
My question is... how do I calculate the number of excluded off target bases or at least the percent of the total passing filter bases?
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