Mutect2-exome-panel.vcf Not Found

April 11, 2020 20:03

I cannot find the "Mutect2-exome-panel.vcf" file in the resource bundle for b37. Could you please advise about how I could access this resource to use as a panel of normals for Mutect2?

Thanks

3 comments

Ryan Gimple

April 11, 2020 20:15
In case anyone else is looking for this file, I found it on this website:

https://console.cloud.google.com/storage/browser/gatk-best-practices/somatic-b37/
0

Comment actions Permalink
M_San

May 06, 2020 12:28
How many samples are included in this PON?

Thanks
0

Comment actions Permalink
David Benjamin

May 14, 2020 01:36
About 400.
0

Comment actions Permalink

Please sign in to leave a comment.

Welcome

Get Email Notifications

GATK Team Out of Office

The GATK team will be out of office during December 9th 2022 to January 9th 2022 in observance of the holidays. We will not be able to answer posts from within this period. If you are still experiencing issues when we are back, please re-post your inquiry.