Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

Filtermutectcalls doubt with the vcf file



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    Gökalp Çelik

    Hi Estel

    Can you elaborate more about the issue that you are seeing with your tumor and normal results? 

    Were you expecting a mutation in the tumor but not in the normal where you observe this result?

    Can you share a picture of the region as well as the resulting VCF line?


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    Hi! I already solved the problem it was a missundersanding, thanks!

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