Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

Issue with Funcotator Datasource 1.8 during variant calling (germline). No variants are matched.


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    Gökalp Çelik

    Hi osman doluca

    Funcotator resource 1.8 is not compatible with GATK We recommend sticking to version 1.7 or using GATK master branch builds or docker nightly builds if you wish to use 1.8 resources. 


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