Splitting .g.vcf file by chromosome.

Follow

Nikee Shrestha

• October 18, 2023 01:46

Can we split .g.vcf files by chromosome?

0

• 

  Gökalp Çelik

  • October 18, 2023 07:45

  Hi Nikee Shrestha

  Yes you can. You can use the tool SelectVariants and use -L parameter to indicate which chromosomes to include and you will get a subset of variants for your selected chromosomes. 

  Regards. 

  0

  Comment actions Permalink

Please sign in to leave a comment.