Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

Funcotator - Unexpected value: Ensembl_canonical



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    Gökalp Çelik

    Hi Tommaso Mazza

    The resource bundle 1.8 is updated and designed to be used with GATK which will be released soon. If you wish to use this bundle we recommend using the nightly docker builds or building GATK from the github master branch. Beware that this version is still being tested and although it is tested rigorously there may still be some uncaught edge cases. If you still observe issues please let us know. 

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    Tommaso Mazza

    Allright. The bundle 1.7 works fine.

    Thank you for clarifying

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