Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

License / use terms for GATK resource bundle



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    David Benjamin

    Mariana E. M. The panels of normals I generated myself using BAM files sequenced at the Broad Institute.  There's no official license other than my word that anyone can use them freely.  Our version of gnomAD is simply the public version with all of the INFO except AF stripped away, and I'm sure gnomAD has a statement somewhere.

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    Mariana E. M.

    David Benjamin thank you very much for your reply, this was helpful.
    I will check the use terms of the gnomAD files. I suppose the other files in the bucket can also be used freely, right?

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