Hello GATK help,
I am currently trying to understand the workflow for Somatic copy number variants (CNVs).
And I am interested to know if I only have one sample to analyze i,e 1 pair of normal & tumor exome data, can I still use to create panel of Normals or run the somatic CNV workflow to derive CNVs from exome data? Please let me know. As documentation says , I need 40 samples first to create panel of Normals then run the paired sample for copy number detection.
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