Welcome to the GATK Forum! The GATK community forum is a place to resolve GAT...
Reported Mutect2 issue - Important information about GATK >= 126.96.36.199
🚨 Users have reported decreased Mutect2 variant calling accuracy in versions ...
⚙️ GATK 4.3 release
The latest GATK release came out a few weeks ago, with changes corresponding...
Introducing NVIDIA's NVScoreVariants, a new deep learning tool for filtering variants
If you know only one thing about NVIDIA, it's probably that they manufacture...
Hacking GATK to reduce your cloud costs
When it comes to research, time is money. And that couldn't be any more liter...
GenotypeGVCFs and the death of the dot
If you have been keeping up with our GATK release notes, then you know that w...
Please update your GATK - Important information about GATK 188.8.131.52
🚨 If you are using GATK version 184.108.40.206, please update to the newest releas...
DRAGEN-GATK Webinar [December 3, 2021]
In this webinar, participants learned about the whats, hows, and whys of this...
🗓️ DRAGEN-GATK Webinar [Oct. 21, 2022]
This October 21, join us for an interactive online workshop on Whole-Genome ...
🗓️ DRAGEN-GATK Webinar [Dec. 2, 2021]
On December 2, 2021, instructors from the Broad Institute taught a 1-hr virtu...
🗓️ Mutect2 Webinar [Nov 17 2020]
On November 17, 2020, instructors from the Broad Institute taught a 1-hr virt...
🗓️ GATK Workshop in San José, Costa Rica [Feb. 11-14, 2020]
On February 11-14, 2020, instructors from the Broad Institute taught a 4-day ...
🗓️ GATK Workshop in Gujarat, India [Mar. 2-5, 2020]
On March 2-5, 2020, instructors from the Broad Institute taught a 4-day GATK ...
Note that the information in this documentation guide is targeted at end-users. For developers, the source code and related resources are available on GitHub.