Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

GenotypeGVCFs Follow

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    Dan Vanderpool

    I may be missing something, how does one perform "GenotypeGVCFs" on only a subset of individuals in a genomeDB?  It can't be the case that I have to recreate the entire genomedb if I want to remove individuals from it before joint genotyping? 

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