Keep only paired reads that are second of pair
Category Read Filters
Overview
Keep only paired reads (0x1) that are second of pair (0x80).GATK version 4.2.6.1-SNAPSHOT built at Wed, 13 Apr 2022 13:12:10 -0700.
SecondOfPairReadFilter Follow
Keep only paired reads that are second of pair
GATK version 4.2.6.1-SNAPSHOT built at Wed, 13 Apr 2022 13:12:10 -0700.
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