Median mapping quality of reads supporting each allele (MMQ)
Category Variant Annotations
OverviewMedian mapping quality of reads supporting each alt allele.
The output is an array containing, for each alt allele, the median mapping quality over all reads that best match that allele.
GATK version 22.214.171.124-SNAPSHOT built at Mon, 8 Nov 2021 14:59:32 -0800.