Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

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Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

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    joy bordini

    Hi there,


    I have a question: Is this function already available? Can you please provide an example line code and required arguments please

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    François Kroll

    Same here I'm afraid.

    I pulled v4.2.0.0 as a docker, but cannot see this command available?

    An example usage would also be greatly appreciated!

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