Genome Analysis Toolkit

Variant Discovery in High-Throughput Sequencing Data

GATK process banner

Need Help?

Search our documentation

Community Forum

Hi, How can we help?

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Learn more

AddOrReplaceReadGroups (Picard) Follow


  • Avatar
    Chahat Upreti

    Hi, the link for GATK dictionary entry is missing.

    Comment actions Permalink
  • Avatar
    Brian Wiley

    AddOrReplaceReadGroups doesn't add an @PG program line for the call to this program.  MarkDuplicates does.  Is there a list of which Picard tools add @PG line for metadata processing and which don't?

    Comment actions Permalink

Please sign in to leave a comment.

Powered by Zendesk