Identify somatic copy number variant (CNVs) in a case sample. Requires an appropriate Panel of Normals (PON).
|Somatic CNV case sample||Case BAM to CNV||universal||yes||b37|
|Somatic CNV PON creation||Normal BAMs to PON||universal||yes||b37|
Documentation for these workflows is in development.
Where can we find a description on what all of the outputs of the somatic copy number pipeline are?
In particular we want to know what each of these seg files are:
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