Metrics
Category Metrics
Overview
This table summarizes the values that are specific to this metric.
| Metric | Summary |
|---|---|
| SAMPLE |
The sample name |
| ESTIMATE |
The estimate of contamination from the model (on the 0.0-1.0 scale) |
| STDERR |
The standard error of the estimate |
| TVAL |
The test statistic for the estimate |
| PVAL |
The p-value of the estimate |
| LOG10_PVAL |
The log p-value of the estimate |
| CALL_RATE |
The call rate of the sample (number of non-missing genotypes) |
| NHOM |
The number of homozygous genotypes used to fit the model |
GATK version 4.6.0.0-33-gdffedfb built at Wed, 23 Oct 2024 21:44:48 -0400.
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